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  • Espinoza Brewer posted an update 3 days, 8 hours ago

    albicans cell surface is locally coated with extracellular glucans (~6-fold vs. uncoated C. albicans), which vastly exceeds the forces between S. gordonii andC. albicans. The enhanced binding affinity of S. click here mutans to glucan-coated C. albicans resulted in a larger structure during early biofilm initiation compared to S. gordonii-C. albicans biofilms. Ultimately, this resulted in S. mutans dominance composition in the 3-species biofilm model under cariogenic conditions. This study provides a novel biophysical aspect of Candida-streptococcal interaction whereby extracellular glucans may selectively favor S. mutans binding interactions with C. albicans during cariogenic biofilm development.Inflammation is triggered by stimulation of innate sensors that recognize pathogens, chemical and physical irritants, and damaged cells subsequently initiating a well-orchestrated adaptive immune response. Immune cell activation is a strictly regulated and self-resolving process supported by an array of negative feedback mechanisms to sustain tissue homeostasis. The disruption of these regulatory pathways forms the basis of chronic inflammatory diseases, including periodontitis. Ubiquitination, a covalent posttranslational modification of target proteins with ubiquitin, has a profound effect on the stability and activity of its substrates, thereby regulating the immune system at molecular and cellular levels. Through the cooperative actions of E3 ubiquitin ligases and deubiquitinases, ubiquitin modifications are implicated in several biological processes, including proteasomal degradation, transcriptional regulation, regulation of protein-protein interactions, endocytosis, autophagy, DNA repair, and cell cycllammation in the oral cavity. This review presents information on the ubiquitin system and regulation of NF-κB by ubiquitination using A20 as a representative molecule and highlights how the dysregulation of this system can lead to several immune pathologies, including oral cavity-related disorders mainly focusing on periodontitis.A new coronavirus (SARS-CoV-2) is a global threat to world health and economy. Its dimeric main protease (Mpro), which is required for the proteolytic cleavage of viral precursor proteins, is a good candidate for drug development owing to its conservation and the absence of a human homolog. Improving our understanding of Mpro behavior can accelerate the discovery of effective therapies to reduce mortality. All-atom molecular dynamics (MD) simulations (100 ns) of 50 mutant Mpro dimers obtained from filtered sequences from the GISAID database were analyzed using root-mean-square deviation, root-mean-square fluctuation, Rg, averaged betweenness centrality, and geometry calculations. The results showed that SARS-CoV-2 Mpro essentially behaves in a similar manner to its SAR-CoV homolog. However, we report the following new findings from the variants (1) Residues GLY15, VAL157, and PRO184 have mutated more than once in SARS CoV-2; (2) the D48E variant has lead to a novel “TSEEMLN” loop at the binding pocket; (3) inand is applicable to other coronaviral proteins.Interface orientation between zinc phthalocyanine (ZnPc) and fullerene (C60) affects their interfacial charge separation dynamics; however, the underlying physical origin is still elusive. In this work, we have employed the time-dependent density functional theory (TDDFT) method to explore excited-state properties of ZnPc and C60 heterojunctions with both face-on and edge-on configurations. Spectroscopically bright absorption is from locally excited (LE) singlet excitons within ZnPc. In the face-on configuration, LE excitons are much higher in energy than charge-transfer (CT) excitons, thereby making charge separation process favorable. However, in the edge-on configuration, LE excitons are the lowest ones and CT ones are higher in energy; thus, charge separation is not efficient. Subsequently, we have carried out TDDFT-based nonadiabatic dynamics method to simulate photoinduced exciton and charge separation dynamics of ZnPc and C60 heterojunctions with both edge-on and face-on configurations. In the former, there are no exciton transfer and charge separation processes observed within 300 fs simulation time; while, in the latter, fragment-based electronic transition density matrix analysis reveals that only LE excitons |C60ZnPC*⟩ and CT excitons |C60-ZnPC+⟩ are involved. The exciton transfer from |C60ZnPC*⟩ to |C60-ZnPC+⟩ is completed within about 100 fs in which charge separation takes place with electron-hole distances increasing from 1.0 to 4.5 Å. This exciton transfer process is essentially in company with electron transfer from ZnPc to C60 but almost not involving hole transfer. These gained insights not only rationalize experiments but also enrich our knowledge to design donor-acceptor orientations to optimize organic photovoltaic performance.A new chemical labeling-based LC-MS/MS approach was developed for quantitative profiling of nine canonical bases and deoxynucleosides (dNs) in natural products. Using 2-bromo-1-(4-dimethylamino-phenyl)-ethaone (BrDPE) as the tagging reagent, a previously unexploited N-alkylpyrimidine derivative (Nad) was created for one-pot labeling of widescope nucleobases via a flexible bromophilic substitution under mild conditions. The derivatization notably improved the LC-MS detection sensitivity by 31-107 fold, enabling a fast dilute-and-shoot analysis of highly diluted samples. The optimized and validated method demonstrated satisfactory accuracy (87-107%), precision (RSDs less then 7.5%), and recovery (89-105%) for matrix-matched standard addition. The method was applied to simultaneously determine all target analytes and four uncanonical analogues and base-modified species in seven traditional health foods, which differ in contents by up to 600-fold for discrimination among samples. Further, the base-labeled Nads exhibit a unique fragmentation signature that could be used for untargeted screening of nucleobase-containing metabolites by simplified LC-MS/MS workflow to improve quality evaluation of natural medicinal products.

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